Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLH-RAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
3DBO Chain:B ((23-141))
GVLDTSVFIA-----QLD----EALI-PDRVATTVVTLAELRVGVLAAATTDIRAQRLATLESVADMETLPVDDDAARMWARLRIHLAESG--RRVRINDLWIAAVAASRALPVITQDDDFAALDG------
General information:
TITO was launched using:
RESULT:
Template:
3DBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34704 for 793 contacts (-43.8/contact) +
2D Compatibility (PS) -11802 + (NN) -1180 + (LL) 1680
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -48956.0 ( -61.74 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_3DBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DBO-query.scw
PDB file :
Tito_Scwrl_3DBO.pdb
: