Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEVASRELRNDTAGVLRRVRAGEDVTITVSGRPVAVLTPVRPR-RRRWLSKTEFLSRLRGAQADPGLRNDLAVLAGDTTEDLGPIR |
1KDW Chain:A ((283-313)) | ----------------------GSDNKIALAARPVKAITPPTPAVRASWVHKT---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1364 for 87 contacts (15.7/contact) +
2D Compatibility (PS) -2992 + (NN) 102 + (LL) 3556
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 180.0 ( 2.07 by residue)
QMean score : 0.270
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