Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRV-RDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIA-DWGE-AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR-FAKLYHELERGTDPLAYVDPYL---PIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM--RHRDAYAAVIDELDELYGDGRSVSF-HALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAC-VRYRRRTGV |
| 4C0C Chain:A ((23-456)) | ----------------GHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEAS---TSDLLGGLLKAVYRDGT-RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPA---QLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG-------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR-DEVPDPDYHTMVVGPTLNQCLVKYTRK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254897 for 3402 contacts (-74.9/contact) +
2D Compatibility (PS) -44939 + (NN) -22691 + (LL) 892
1D Compatibility (HY) -36800 + (ID) 7100
Total energy: -365535.0 ( -107.45 by residue)
QMean score : 0.644
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