Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHI-EVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA
2O7K Chain:A ((17-104))
---------------------------------------------------SGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL-
General information:
TITO was launched using:
RESULT:
Template:
2O7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53219 for 594 contacts (-89.6/contact) +
2D Compatibility (PS) -9574 + (NN) -2471 + (LL) 4676
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -69538.0 ( -117.07 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_2O7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7K-query.scw
PDB file :
Tito_Scwrl_2O7K.pdb
: