Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPR----------LVSFHDLTIEDPPH-PQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALR---PRGRGPS-----LRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR
3RZK Chain:A ((46-202))
---------------------------------------------------------RVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIR----DHVSGVTGQTFNFVLINRYKDGSDHICEHRDD-ERELAPGSPIASVSFGASRDFVFRHKDSR---PSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFR-----
General information:
TITO was launched using:
RESULT:
Template:
3RZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54724 for 863 contacts (-63.4/contact) +
2D Compatibility (PS) -14748 + (NN) -11509 + (LL) 4148
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -87883.0 ( -101.83 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_3RZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZK-query.scw
PDB file :
Tito_Scwrl_3RZK.pdb
: