Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAAPTNGAPLSYPSI---CEGVHWGHLVGGHQPAY
1ZFO Chain:A ((4-31))
MNPNCARCG-KIVYPTEKVNCLDKFW------HKACF
General information:
TITO was launched using:
RESULT:
Template:
1ZFO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3758 for 129 contacts (29.1/contact) +
2D Compatibility (PS) -2761 + (NN) -3129 + (LL) 40
1D Compatibility (HY) 400 + (ID) 150
Total energy: -1842.0 ( -14.28 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1ZFO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZFO-query.scw
PDB file :
Tito_Scwrl_1ZFO.pdb
: