Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------MCSRMADEPRL--EAGAHPFE--EGRDKAPELRATQMDHVRFTEGRRERNRDRLERSQQFRQPGR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3X0D Chain:A ((29-652)) | DYDMAQELARSRFGDMILDFDRNDKFLAGLKTTIAEKKHENTDGKVHVLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSPWSDKITVISERSTDVSQIGGSRADIIVAEVFDTELIGEGALRTFKEALERLAKPGCRVVPSTGNVYIVPVESHLLKMFNDIPRLNGEKDEEPLGRCSGTAAVFDVQLSEM------------------KTHEFRELSEPIVAFKFDFEHEEKIIFDESFVREAVAHSSGTIDALLMWWDIDMDRNGTTFIDMGPKWKNKNNYAWRDHWMQAVYYLPEKKKVEMNQTFEIVCNHDEFSLWFSNVGKDKSRSYCVCGLHSMLSRQTVYHVNEMFENQKFKDEVDKLSKGLHVATVGEGSFLGLLAAKTAKRVTIIDGNERFRDIFFKYIHYYKLTNVEIIEKVTSLTDSPDIVLAEPFYMSAMNPWNHLRFLYDVEVLKMMHGDELRVEPHMGVLKAIPEKFEDLQNIASDVGTVNGFDLSFFDEISTKARTATDAIVDEQSLWEYAGIVKGDAVEILRFPIDGRVSSQKCVVNIDNMSSSNAIPMWMEWEFGGINLSTGLLSISSAGVPEWNKGYKQGVYFPITALRNDKSLCLHALFDKSTGDINFQFGKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3011 for 144 contacts (-20.9/contact) +
2D Compatibility (PS) -4365 + (NN) -3497 + (LL) 1104
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -13469.0 ( -93.53 by residue)
QMean score : ?
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