Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
2FBQ Chain:A ((9-56))
----------RILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAV-----------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FBQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36280 for 307 contacts (-118.2/contact) +
2D Compatibility (PS) -5473 + (NN) -3611 + (LL) 12680
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -36184.0 ( -117.86 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2FBQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBQ-query.scw
PDB file :
Tito_Scwrl_2FBQ.pdb
: