Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALAPPVK-RQEQYRLEPHESAVRSGLDLAGFNKLADELEDEALLDATRRAR
4TYB Chain:A ((312-368))
--TMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPPGDPPQPEYDLE-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TYB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 92 for 210 contacts (0.4/contact) +
2D Compatibility (PS) -5049 + (NN) -450 + (LL) 2604
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -5703.0 ( -27.16 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_4TYB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYB-query.scw
PDB file :
Tito_Scwrl_4TYB.pdb
: