Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTRRFAASMVGT-TLTAATLGLAALGFAGTASASSTDEAFLAQLQA-DGITPPSAARAIKDAHAVCDALDEGHSAKAVIKAVAK-ATGLSAKGAKTFAVDAASAYCPQYVTSS
5DPO Chain:A ((11-114))
-FFKDYQKKNV--MRLLQDSLEKIINEWLKTDDESHTKLKSLQELSEMDINATSFAEHSPLPDFVTRLWLD-------PHKALDAMDKNISKNEIRKLIKETAREIELVFTHQK
General information:
TITO was launched using:
RESULT:
Template:
5DPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12391 for 479 contacts (-25.9/contact) +
2D Compatibility (PS) -10342 + (NN) -4848 + (LL) 388
1D Compatibility (HY) 2000 + (ID) 200
Total energy: -25393.0 ( -53.01 by residue)
QMean score : 0.110
(partial model without unconserved sides chains):
PDB file :
Tito_5DPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DPO-query.scw
PDB file :
Tito_Scwrl_5DPO.pdb
: