Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVTVSIPTILRPHTGGQKSVSAS-----GDTLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
2K9X Chain:A ((5-102))
NHITVQFAGGCELLFAKQTSLQLDGVVPTGTNLNGLVQLLKTNYVKERPDLLVDQTGQTLRPGILVLVNSCDAEVVGGMDYVLNDGDTVEFISTLHGG
General information:
TITO was launched using:
RESULT:
Template:
2K9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42326 for 640 contacts (-66.1/contact) +
2D Compatibility (PS) -10220 + (NN) -4605 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -65851.0 ( -102.89 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_2K9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9X-query.scw
PDB file :
Tito_Scwrl_2K9X.pdb
: