Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGI-ATGA-T--HGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGR-W----LSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVV-IGWGLAGYLWAATAGAVAWLLM-LMA-S-PTARS--AA-S-LLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLV--PLSAMQGNLIAHFVDR--RTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGP-D-YQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTL-L-LLLP-MPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 5C6N Chain:A ((18-440)) | -----------------------------LLRSLSIPAMIGMFVMALYNVVNTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEA-NQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGLVLRYFLTGKSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASL-MMIAINSMLLRF-GSDFYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVIQAGVSAMHILFCVTFLIGAQIVAGGLYQSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWAFPIADVLSFILTVVLLYR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298891 for 3275 contacts (-91.3/contact) +
2D Compatibility (PS) -41130 + (NN) -7168 + (LL) 1872
1D Compatibility (HY) -13600 + (ID) 2150
Total energy: -361067.0 ( -110.25 by residue)
QMean score : 0.194
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