Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESRWVLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGR----GVVAGASYEARAYGARSAMPMHQARRLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVETFCE------RLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLWGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSDMSTLTRSATMPYPTTDAGALFTVARRLLPDPLQIG--PIRLLGVGFSGLSDIRQESLFADSDLTQETAAAHYVETPGAVVPAAHDATMWRVGDDVAHPELGHGWVQGAGHGVVTVRFETRGSGPGSARTFPVDTGDISNASPLDSLDWPDYIGQLSVEGSAGASAPTVDDVGDR |
| 3T5H Chain:A ((3-340)) | -----VLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILP-NAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLD-------ISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVR-KSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKL--DKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETA-YSESVKLLQKILEEDERKIRRIGVRFSKF----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167544 for 2529 contacts (-66.2/contact) +
2D Compatibility (PS) -34700 + (NN) -9428 + (LL) 6280
1D Compatibility (HY) -24400 + (ID) 5000
Total energy: -234792.0 ( -92.84 by residue)
QMean score : 0.463
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