Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSGHPVTLDDLPLRADLRGKAPY-GAPQLAVP--VRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFVP-SYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPGIAIV--DEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSS-VTQAAARA-------ALRHSDDTLSSVAALIAERERVTTSLNDMGF--RVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDVG----IPGYLRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP |
| 1IJI Chain:A ((4-350)) | -------VTITDLA-RENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQT----------LNRYPECQPKAVIENYAQY----AGVK--PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQ-GISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYP-HLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRE------RVAQIIAEREYLIAALKEIPCVEQVFDSETNYIL-ARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163320 for 2639 contacts (-61.9/contact) +
2D Compatibility (PS) -36181 + (NN) -24508 + (LL) 3196
1D Compatibility (HY) -28400 + (ID) 6050
Total energy: -255263.0 ( -96.73 by residue)
QMean score : 0.469
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