Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPTMTSAGWAPGVVQFREYQRRWLRGDVLAGLTVAAYL---------IPQAMAYATVAGL------PPAAGLWASIAPLAIYALLGSSRQLSIGPESATALMTAAVLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITGTSVEGN---EFFSEVHSFATSVTRVHWPTFVLAMSVLALLTMLTRWAP---------RAP---GPIIAVLAATMLVAVMSLDAKGIAIVGRIPSGLPTPGVPP------VSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARR---GQEVNANAELRAVGACNIAAGLTHGFPVSSSSSRTALADVV----GG-----RTQLYSLIALGLVVIVMVFASGLLAMFPIAALGALVVYAALRLIDLSEFR----------------------RLARFRRSELMLA-LATTAAVLGLGVFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRRR |
4YZF Chain:A ((388-877)) | -------------------RRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAF-FSFCETNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTY----------LPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFIQDT--YTQKL-SVPDGFKV-VIHPLGLRSEFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTVM--IQEVKEQRISGLLVAVLVGLSIL-MEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTP-ASLALPFVLILTVPLRRVLLPLI--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -282021 for 3125 contacts (-90.2/contact) +
2D Compatibility (PS) -41480 + (NN) -23305 + (LL) 12788
1D Compatibility (HY) -24800 + (ID) 3100
Total energy: -361918.0 ( -115.81 by residue)
QMean score : 0.303
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