Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPSPDSPAPLNVTVPFDSELGLQFTELGPDGARAQLDVRPKLLQLTGVVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDFVRSISSGMVYGTAEPLHRGRRQQLWLVTITDDTDRVVARGQVRLQNLEARP
3TEA Chain:A ((16-148))
--PDVASHYPVAYEQTLDGTVGFVIDEMTPERATASVEVTDTLRERWGLVHGGAYCALAAMLATEATVAVV--HEKGMMAVGQSNHTSFFRPVKEGHVRAEAVRIHAGSTTWFWDVSLRDDAGRLCA---VSSMSIAVRP
General information:
TITO was launched using:
RESULT:
Template:
3TEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74649 for 992 contacts (-75.3/contact) +
2D Compatibility (PS) -13812 + (NN) -5987 + (LL) 268
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -104780.0 ( -105.62 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3TEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TEA-query.scw
PDB file :
Tito_Scwrl_3TEA.pdb
: