Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASSTTFVIVGGGLAGAKAVEALRRSDFGGRIILFGDEEHLPYDRPPLSKEFLAGKKSLSDFTIQTSDWYRDHDVDVRLGVRVSSLDRSAHTVELPDGAAVRYDKLLLATGSAPRRPPIPGSDAAGVHYLRSYNDAVALNSVLVQGSSLAVVGAGWIGLEVAASARQRGVDVTVVETAIQPLLAALGEAVGKVFADLHRDQGVDLRLQTQLEEITAADGKATGLKMRDGSTVAADAVLVAVGAKPNVELAQQAGLAMGEGGVLVDASLRTSDPDIYAVGDIAAAEHPLLGTRVRTEHWANALKQPAVAAAGMLGRPGE--YAELPYLFTDQYDLGMEYVGHAPSCDRVVFRGNVA--GREFLSFWLDGDSRVLAGMNVNVWDVVDDVKGLIRSGNPVDVDRLVDPQWPLADLTTN |
| 2YVJ Chain:A ((11-402)) | -------VVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAH----GDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSV--TGSVDGV---VLLDDGTRIAADMVVVGIGVLANDALARAAGLAC-DDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQ-GIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLA-SGDEEIVRGEVSLDAPKFTLIELQ-KGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254324 for 3357 contacts (-75.8/contact) +
2D Compatibility (PS) -41530 + (NN) -16928 + (LL) 440
1D Compatibility (HY) -24800 + (ID) 7750
Total energy: -344892.0 ( -102.74 by residue)
QMean score : 0.464
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