Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MKLTTMIKTAVAVVAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKV----SDLKSS-TAVIPGYPVAGQVWEATATVNAIRGS----VTPAVSQFNARTADGINYRVLW-QAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP------------------ |
| 2W1N Chain:A ((10-237)) | AEVTGSVSLEALEEVQVGENIEVGVGIDELVNAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLT-----GEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGKKVAEIGKDET--SYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54575 for 807 contacts (-67.6/contact) +
2D Compatibility (PS) -16231 + (NN) 2432 + (LL) 12
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -75562.0 ( -93.63 by residue)
QMean score : 0.132
|
|
|