Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVRE-KPCRATTAG-------IPLL-RLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHP----------LGEMRYLPVASRPFVQR-----HLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRRRPG |
| 3T1B Chain:B ((6-253)) | ----------LNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASG--------RIRISAPSELTKRMMMPMFNAFMEKYPDIHIE-------LMMSNQAD-LDPTEWDVI--FRVGPQRDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLKWQLTNSQGETVVNSDRGRFQASALNVV------RSACSEGLGITLMPDVMLREFLEDGSLVQV---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3T1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95372 for 1454 contacts (-65.6/contact) +
2D Compatibility (PS) -23019 + (NN) 2337 + (LL) 3304
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -128200.0 ( -88.17 by residue)
QMean score : 0.219
|
|
|