Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTD-NGEEFEVPFAD----------DAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2V3B Chain:B ((2-45))
-----------------------------RKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2V3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1072 for 139 contacts (-7.7/contact) +
2D Compatibility (PS) -3351 + (NN) -1440 + (LL) 5428
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -3535.0 ( -25.43 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_2V3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V3B-query.scw
PDB file :
Tito_Scwrl_2V3B.pdb
: