Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTP-RPNPRRVVIEVQIERVLGSADLLDRA
2HQ7 Chain:A ((3-135))
-----IDEKFLIESNELVESSKIVMVGTNGENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDNKFAGLMLVGTIEILHDRASKEMLWTDGCEIYYPLGIDDPDYTALCFTAEWGNYYRHLKN--
General information:
TITO was launched using:
RESULT:
Template:
2HQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33740 for 894 contacts (-37.7/contact) +
2D Compatibility (PS) -14406 + (NN) -6259 + (LL) 916
1D Compatibility (HY) 400 + (ID) 800
Total energy: -53889.0 ( -60.28 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_2HQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQ7-query.scw
PDB file :
Tito_Scwrl_2HQ7.pdb
: