Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
3NC5 Chain:A ((124-161))
--------------------------KRRIVVRSFIGDALDHLSPLIKQNAENLLAPYLERG--
General information:
TITO was launched using:
RESULT:
Template:
3NC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2211 for 144 contacts (15.4/contact) +
2D Compatibility (PS) -3716 + (NN) 288 + (LL) 132
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -4785.0 ( -33.23 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3NC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NC5-query.scw
PDB file :
Tito_Scwrl_3NC5.pdb
: