Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSG-----FWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
1B7A Chain:A ((52-124))
-------------------------------------------------ITWDGL-DPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN------NISSG--------TVLSD-----YVGSGPPKGTGLHRYVWLVY---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34598 for 395 contacts (-87.6/contact) +
2D Compatibility (PS) -7697 + (NN) -6953 + (LL) 5448
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -51850.0 ( -131.27 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1B7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B7A-query.scw
PDB file :
Tito_Scwrl_1B7A.pdb
: