Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDRAPSRGYARPRFDDDYGRYDGRDYDDARSDSRGDLRGEPADYPPPGYRGGYADEPRFRPREFDRAEMTRPRFGSWLRNSTRGALAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDGSPVIMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRIAETGFYAYQ |
| 3P04 Chain:A ((65-140)) | ----------------------------------------------------------------------------------------------------------------------------------------------------YQSTIVPVELHSFEDAQVIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCFALHGKMQKIDSVTFAVVPELSNI----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16591 for 480 contacts (-34.6/contact) +
2D Compatibility (PS) -8225 + (NN) -3927 + (LL) 5956
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -24637.0 ( -51.33 by residue)
QMean score : 0.518
|
|
|