Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVL-LHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFL-------PAAQGRTPLP---FYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRA---GYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWD-----KPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT |
| 2YXP Chain:X ((2-304)) | INAIRTPDQRFSNLDQYPFSPNYLDDLPG-YPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAW----KYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMV-AQRDQACIDIST---EAISFWQNDWNGQTFMAI-GMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122199 for 2443 contacts (-50.0/contact) +
2D Compatibility (PS) -29791 + (NN) -14407 + (LL) 1396
1D Compatibility (HY) -22800 + (ID) 5950
Total energy: -193751.0 ( -79.31 by residue)
QMean score : 0.424
|
|
|