Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGV--IPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGL-GSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGV-GVDVNQILKPQFGQWA |
| 3HMC Chain:A ((4-181)) | -------------------------------------MGHIIDISKWNGDINWSIAK-QHIDFIIARVQDGSN-----YVDPLYKGYVQAMKQHGIPF-GNYAFCRFV----S--IADAKKEAQDFWN---RGD-KSATVWVADVEVKTM-NDMRAGTQAFIDELYRL-GAKKVGLYVGHHMYTPFGMANVKSDFVWIPRYGG-N-KPAYPCDIWQYTETG-NVPGIGKCDLNSLIG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34390 for 1428 contacts (-24.1/contact) +
2D Compatibility (PS) -18405 + (NN) -7822 + (LL) 3428
1D Compatibility (HY) -9600 + (ID) 1100
Total energy: -67889.0 ( -47.54 by residue)
QMean score : 0.351
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