Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
1G3T Chain:A ((3-226))
--DLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEASRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV---------PGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEI-VDR--HITLSHNG-KDVELLDDLAHTIRIEEL
General information:
TITO was launched using:
RESULT:
Template:
1G3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103958 for 1630 contacts (-63.8/contact) +
2D Compatibility (PS) -23944 + (NN) -17242 + (LL) -452
1D Compatibility (HY) -19200 + (ID) 6400
Total energy: -171196.0 ( -105.03 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1G3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3T-query.scw
PDB file :
Tito_Scwrl_1G3T.pdb
: