Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRG-GHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGH-AVTPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 2RHC Chain:B ((26-243)) | ---------------LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR---------------EHYSDIWEVSTEEAFDRITARVPIGRYV---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131146 for 1778 contacts (-73.8/contact) +
2D Compatibility (PS) -22864 + (NN) -4175 + (LL) 5108
1D Compatibility (HY) -11600 + (ID) 3900
Total energy: -168577.0 ( -94.81 by residue)
QMean score : 0.546
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