Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQEMTEQWLEGCAVQRIMFRDGLV-LNFDDYNELVISVPLQLTLP-------AIETSPAEVVAIDPNDPADHERPLFDFAGATCTAFVWYDTGDLHLEFSDGHQIDVHPDDRVTAWELYGKYHGYAACLAPGKLRVVRHDVADANGDQ
2BUJ Chain:A ((225-292))
----ERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ--IPQSPRHSSALWQLLNSMMTVDP-----HQRP-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10132 for 316 contacts (-32.1/contact) +
2D Compatibility (PS) -5901 + (NN) -1910 + (LL) 4464
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -18779.0 ( -59.43 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2BUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BUJ-query.scw
PDB file :
Tito_Scwrl_2BUJ.pdb
: