Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MANEP-AIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGA-APEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYR-LDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQ-------NTFSFLTQGRTSDTTLHRHFNW--VRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 3JR1 Chain:A ((14-309)) | NLYFQGMWKSISQVLAEQFGAYYFIK------HKEKLYSGEMNEIWLINDE------------------------VQTVFVKINERSYR-------SMFRAEADQLALLAKTNSINVPLVY---GIGNSQGHSFLLLEALN--------------------KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHN--PKPSILHGNLWIENCIQVDDKIFVCNP--ACYWGDRECDIAFS-------------SLFEPFP-----TNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQ-----------SYVSLTQKLINQILHK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136457 for 2181 contacts (-62.6/contact) +
2D Compatibility (PS) -30544 + (NN) -11241 + (LL) 7036
1D Compatibility (HY) -15200 + (ID) 1950
Total energy: -188356.0 ( -86.36 by residue)
QMean score : 0.415
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