Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLPADPSPTLSAYAHPERLVTADWL-SAHMGAPGLAIVESDEDVL--------LYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLW----LAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADES----------GRFRSREELERLYDF--INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
3IPP Chain:A ((117-410)) | ----------LQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEP-LWNKVSDEQLKAMLAKHGIRHDTTVILYG-RDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR--------WGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASET-FMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93975 for 2222 contacts (-42.3/contact) +
2D Compatibility (PS) -28686 + (NN) -15509 + (LL) 1076
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -154744.0 ( -69.64 by residue)
QMean score : 0.357
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