Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAF------RNCTFERTTLWHSTFAQC----------SMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGG
2XTX Chain:A ((24-175))
------------------------ENSTFFNCDFSGADLSGTEFIGCQFYDRESQKGCNFSRAMLKDAIFKSCDLSMADFRNSSALGIEIRHCRAQGADFRGASFR---------CSAYITNTNLSYANFSKVVLEKCELWENRWIGAQVLGATFSGSDLSGGEFSTFDWRAANFT-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2XTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97896 for 965 contacts (-101.4/contact) +
2D Compatibility (PS) -12696 + (NN) 3493 + (LL) 3532
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -110667.0 ( -114.68 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_2XTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XTX-query.scw
PDB file :
Tito_Scwrl_2XTX.pdb
: