Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
2IXK Chain:A ((4-179))
MKATRLAIPDVILFEPRVFGDDRGFFFESYNQRAFEEACGHPVSFVQDNHSRSARGVLRGLHY-QIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTTDFWAPEHERCIVWNDPELKIDWPLQD--APLLSEKDRQGKAFAD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2IXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99847 for 1346 contacts (-74.2/contact) +
2D Compatibility (PS) -18656 + (NN) -8307 + (LL) 1772
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -141838.0 ( -105.38 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_2IXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXK-query.scw
PDB file :
Tito_Scwrl_2IXK.pdb
: