Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTATEELTFESTSRFAEVDVDG--PLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRF-ALASTPESLTATRAMGKSFAGADFEAGM-MWREVYRL---RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGGR
3V1M Chain:A ((4-283))------LTESSTSKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHL-------KNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGQWAQWEHADEFNRLVIDFL----


General information:
TITO was launched using:
RESULT:

Template: 3V1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156620 for 2472 contacts (-63.4/contact) +
2D Compatibility (PS) -29336 + (NN) -13742 + (LL) 796
1D Compatibility (HY) -24000 + (ID) 6300
Total energy: -229202.0 ( -92.72 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_3V1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V1M-query.scw
PDB file : Tito_Scwrl_3V1M.pdb: