Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPA-DCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ-PNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFI--KWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDD-AIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPAANQEPEHG |
| 5AJO Chain:A ((133-389)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------VDLPATSVVITFHNEARSALLRTVVSVLKKSPP-HLIKEIILVDDYSNDPEDG-ALL----GKIEKVRVLRNDRREGLMRSRVRGADAA----QAKVLTFLDSHCECNEHWLEPLLERVAED-RTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKW-DYMTPEQRRSR-----QGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116409 for 2070 contacts (-56.2/contact) +
2D Compatibility (PS) -27213 + (NN) -12325 + (LL) 26340
1D Compatibility (HY) 400 + (ID) 1400
Total energy: -130607.0 ( -63.10 by residue)
QMean score : 0.247
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