Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDLKLLRENPDA--VRRSQLSRGEDPALVDALLTADA----------ARRAVISTADSLRAEQKAASKSVGGASPEERPPLLRRA---------KELAEQVK--AAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAVLDVVGEPSYLENPK-DHLELGESLGLIDMQRG-AKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG--LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAE--HEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY-----RDASGKPQIAATLNGTL-ATTRWLVAILENHQRPDGSVRVPDALVPF-VGVEVLEPVA |
| 3LSS Chain:A ((7-467)) | VLDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEA----------------CVLQLKQLSKDLSDQVAGLAKEAQQLEEER--DKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTKRAKLNHVSIMERLGMMDTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLR---QNVKEYCHMLNGTLCAITRTMCCICENYQTEEGVV-IPDVLRPYMMGIEMI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128569 for 3122 contacts (-41.2/contact) +
2D Compatibility (PS) -42805 + (NN) -24322 + (LL) 1392
1D Compatibility (HY) -34000 + (ID) 7600
Total energy: -235904.0 ( -75.56 by residue)
QMean score : 0.400
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