Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVT-LGGDALTLLTAAHRATTS
3CJL Chain:A ((28-61))
-------------------------------------------DDLFKLLEKVDGKMDMTPE-QTQAFMVGLKLFGEVMMQQRKHPLFKEF
General information:
TITO was launched using:
RESULT:
Template:
3CJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11611 for 157 contacts (-74.0/contact) +
2D Compatibility (PS) -3598 + (NN) -1412 + (LL) 4152
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -14019.0 ( -89.29 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_3CJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJL-query.scw
PDB file :
Tito_Scwrl_3CJL.pdb
: