Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS
2OOC Chain:A ((10-106))
--AVDFAYLEGFAAGDFAVVDEVLALFREQAALWAP-MLD----PTHPGWKDAVHTVKGAARGVGAFNLGEVCERCEAGQE---------SLEGVRTALDAALLDIAAYAHEQALRSLK--
General information:
TITO was launched using:
RESULT:
Template:
2OOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42378 for 703 contacts (-60.3/contact) +
2D Compatibility (PS) -10398 + (NN) -7093 + (LL) 1492
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -61827.0 ( -87.95 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2OOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OOC-query.scw
PDB file :
Tito_Scwrl_2OOC.pdb
: