Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
3DFE Chain:A ((16-36))
--------------------------VLLKKVAKIIEEAGATGYTVVDTGGSNVKFEVLTENREMAEKIADQVAI
General information:
TITO was launched using:
RESULT:
Template:
3DFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -528 for 75 contacts (-7.0/contact) +
2D Compatibility (PS) -2326 + (NN) -1532 + (LL) 2636
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -3600.0 ( -48.00 by residue)
QMean score : 0.828
(partial model without unconserved sides chains):
PDB file :
Tito_3DFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DFE-query.scw
PDB file :
Tito_Scwrl_3DFE.pdb
: