Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVY-STQGAGEYALSNREVIGFGGTASYDST-LNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ |
3BF2 Chain:A ((63-155)) | ---------------------------------------------------------------------------------------------------------------------GAQMTLRIDSVSQNKETYT----VT--AVINEYLLILTVEAQVLKR--GEPVGKPMTVSVRRVLAY------AD---LGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3854 for 418 contacts (9.2/contact) +
2D Compatibility (PS) -8650 + (NN) 739 + (LL) 9336
1D Compatibility (HY) 3200 + (ID) 400
Total energy: 8079.0 ( 19.33 by residue)
QMean score : 0.108
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