Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYARHASRYSLFTLAVSAALLPGAGWAANGDLAGARKPPSVACSWNREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCAADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFHLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQ-GGANQFWLEAWNGRFHGS-SAGNDGIVYCPADSALPNYVLPLGSVTNPGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD |
1A2Z Chain:A ((2-210)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVLITGFEPFGGD----------SKNPTEQIAKYFDRKQIG---N--AMVYGRVLPVSVKRATI-----ELKRYLEE--IKPEIVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDE--------------------KIE-------------------------EDAPLAYMATLPVRAITKTLR------------------------------------DNGIP---------------------ATISYSAGTYLCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLG-------KNTP--SMCLEAEIKAIELAVKVSLDYLEKDRDDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72318 for 1772 contacts (-40.8/contact) +
2D Compatibility (PS) -21803 + (NN) -5122 + (LL) 17332
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -91011.0 ( -51.36 by residue)
QMean score : 0.288
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