Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEVDDKSWDRTRY-FEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV |
3E8V Chain:A ((40-59)) | --------------------------------------------------RSGHASLTAGKGDMLVWASKDGRFGYSKLSFGKDNELKITLDK---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1565 for 42 contacts (-37.3/contact) +
2D Compatibility (PS) -1996 + (NN) 155 + (LL) 4892
1D Compatibility (HY) 800 + (ID) 50
Total energy: 2236.0 ( 53.24 by residue)
QMean score : 0.389
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