Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKP-----GYRCAPINLGANTDPYQ-PLERERRLTRQVLEVLLRF-----RHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIP-VGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 1OLT Chain:A ((52-244)) | -------------------------------------------------------------PLSLYVHIP-FCHKLCYFCGCNKIVTRQ----QHKAD-------QYLDALEQEIVHRAPLFAGRHVSQLHWGG-GTPTYLNKAQ----ISRLMKLLRENFQFNADAEISIEVDPREIEL--DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQ-DEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105897 for 1327 contacts (-79.8/contact) +
2D Compatibility (PS) -19750 + (NN) -10695 + (LL) 4040
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -139852.0 ( -105.39 by residue)
QMean score : 0.391
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