Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEP----EAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
2A3D Chain:A ((1-73)) | ---------------------------------------------------------------------------------------------------------MGSWAEFKQRLAAIKTRLQALGGSEAELAAFEKEIAAFESELQAYK-GKGNPEVEALRKEAAAIRDELQAYRHN--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9022 for 397 contacts (-22.7/contact) +
2D Compatibility (PS) -7537 + (NN) -5168 + (LL) 7508
1D Compatibility (HY) -400 + (ID) 850
Total energy: -15469.0 ( -38.96 by residue)
QMean score : 0.392
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