Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTER---DGLGEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAASFA---PVMLALRQALA---TVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNL-QLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAH--WKQLTHSGGFAFHIAGQFPGLNLAFWAIRG |
| 4CI2 Chain:B ((71-451)) | MINFDTSLPTSHMYLGSDMEEFHGRTLHD--DDSCQVIPV-------LPHVMVMLIPG------------QTLPLQLFHPQEVSMVRNLIQKDR-TFAVLAYSNVR--------EREAHFGTTAEIYAYREEQEYG-IETVKVKAIGRQRFKVLEIRTQSDGI-QQAKVQI-------------LPERVLPSTM---SAVQLQSLSRRHIRAFRQWWQKYQKRK-------------FHCASLTSWPPWLYSLYD------AETLMERVKRQLHEW-----DENLKDESLPTNPIDFSYRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDT--------EITTKNEIFSLSLCG--PMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWKFTATKKDMS---PQKFWGLTRSALLPR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107252 for 2747 contacts (-39.0/contact) +
2D Compatibility (PS) -36757 + (NN) -87 + (LL) 5472
1D Compatibility (HY) -9600 + (ID) 3750
Total energy: -151974.0 ( -55.32 by residue)
QMean score : 0.064
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