Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------MAGEAGQPSEPLNLLAGMAAAPWDYDFFQAL-RRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARERQRNVNDATFKRFM-DVFHHRLLTL--------FYRAWAEAR--------PEISHDRIDDDYWSARLAALSGR---------GMPS---------LRGREPLAD----TARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVE-EYVGQWLELPERSRLGVDSTSLGMDV-CLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDW-----DVNLVLQRHEVPPLGLQ--------GGGRLG--FNTWLGDPGQDARDLLLA------RQYATARP----HEHKEKEHE |
| 4BIJ Chain:A ((1-476)) | MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQR----DSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIAD----DVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLRLR------DAIVAALDLEKAMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12866 for 2377 contacts (5.4/contact) +
2D Compatibility (PS) -34581 + (NN) -4935 + (LL) 1440
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -37610.0 ( -15.82 by residue)
QMean score : 0.038
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