Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQ-LFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
4ZNZ Chain:A ((14-193))
-------------------------------WSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV-IHTDLN--CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPEL---GLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKH---
General information:
TITO was launched using:
RESULT:
Template:
4ZNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110891 for 1316 contacts (-84.3/contact) +
2D Compatibility (PS) -19100 + (NN) -9867 + (LL) 1372
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -157586.0 ( -119.75 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_4ZNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZNZ-query.scw
PDB file :
Tito_Scwrl_4ZNZ.pdb
: