Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLLSLEPRGRQSRWMLLASPLL-AGLLTLVCGALLFACLGHDPWQTLHTV--LVQPLSDLYGL-GELLVKAMPILLCAL---GLALAYQARVWNIGAEGQLL-VG-----ALA-GSAVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLL-ALAA-VWVLAQRSFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRPRLHGRWRKRPALRDALA |
| 3H75 Chain:A ((3-342)) | LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPLTLDQRWIGSMVGDDEEAGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVY-----------GEWNRERAYRQAQQLLKRYPKTQLVWSANDE----------MALGAMQAARELGRKPGTDLLFSGVNSSPEALQALIDGKLSVLEAGHFTLGGWALVALHDDAL-GLDARRLGGPDW----------QLSLFQALTPAQARQLLRLGDQVGTR----------------------VDFRGLSAQGKPDSYRYPFGLQLLLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254656 for 2617 contacts (-97.3/contact) +
2D Compatibility (PS) -32716 + (NN) -12771 + (LL) 5320
1D Compatibility (HY) 4000 + (ID) 2150
Total energy: -292973.0 ( -111.95 by residue)
QMean score : 0.247
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