Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQ-----EQGQWY--------------------FQRY-----IQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 1GTV Chain:A ((1-198)) | ------------------------------------------------------------MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHE--NAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRAR-DNYE-RDAELQQRTGAVYAELAAQG--WGGRWLVVGADVDPGRLAATLA------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28036 for 1303 contacts (-21.5/contact) +
2D Compatibility (PS) -18534 + (NN) -7999 + (LL) 8084
1D Compatibility (HY) 800 + (ID) 1350
Total energy: -47035.0 ( -36.10 by residue)
QMean score : 0.373
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