Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAA--PVEELGSYLLRSARNLAIDHLRGEGSRQRQLD--DWLPEQ-RQ---GEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP
1OR7 Chain:A ((12-187))
--ERVQKGDQKAFNLLVVRYQHKVASLVSRYVP-SGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGA-------NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQP-----------
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57088 for 965 contacts (-59.2/contact) +
2D Compatibility (PS) -17743 + (NN) -14229 + (LL) 296
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -99864.0 ( -103.49 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: